Biophysics of Cells and Single Molecules

Course content

This course offers a comprehensive introduction to the fascinating interplay between physical forces, cell mechanics, and single-molecule dynamics, with an emphasis on bridging experimental biophysics, modeling, and biological data analyses with real-world applications across diverse scientific fields.


The integration of physics into biology is an increasingly prominent field, with mounting evidence supporting the crucial role of mechanical forces in biological systems. Cells, as dynamic and active entities, generate and maintain mechanical forces to engage with their surroundings. They adapt to mechanical stimuli and physical signals through cytoskeletal reorganization, mechanosensitive signaling, and force generation. This course delves into
how disruptions in the cellular mechanical environment impact processes like cell growth, motility, and decision-making.


We will delve into key physical phenomena, such as cytoskeleton dynamics, cell-cell interactions, viscoelasticity, and the effects of mechanical perturbations in diverse cell types including eukaryotic cells, bacteria, and plant cells. Additionally, students will gain hands-on experience in analyzing data from experiments and computational models to explore these phenomena.


This course combines foundational concepts in cell mechanics with insights from recent research. A central component involves critically analyzing primary literature to connect theoretical concepts with cutting-edge experimental results.

Education

MSc Programme in Nanoscience
MSc Programme in Physics
MSc Programme in Physics with a minor subject

Learning outcome

Skills:
By the end of the course, students will be able to:

  • Work with experimental and computational data to explore biophysical phenomena.
  • Describe how cells and single molecules respond to and exert physical forces.
  • Explain how polymerization dynamics drive cellular movement and structural changes.
  • Identify the critical parameters influencing cell motility and force generation.
  • Use physical models to understand the behavior of biological networks and biomembranes.
  • Classify viscous and elastic regimes in cellular microrheology.
  • Explore key experimental techniques in biophysics, including their applications and limitations.

 

Knowledge:

  • Participants will gain an overview of cell mechanics, covering single-molecule systems such
  • as molecular motors, as well as the mechanics of membranes and dynamic filaments in the
  • cytoskeleton, and pattern formation in biology. The course also highlights how these
  • concepts are relevant to biotechnology, biomedical sciences, and materials research.


Competencies:

  • Students will develop the ability to apply physics concepts to achieve a quantitative
  • understanding of complex biological systems. Participants will:
  • Understand the critical role of force and mechanical properties in life processes across all
  • scales.
  • Develop hands-on skills in analyzing experimental and computational data.
  • Gain experience in critically assessing scientific papers and effectively communicating
  • findings to peers.

Lectures, theoretical exercises, student presentations of primary literature as well as a mandatory project.

The final course material will be available on Absalon. Expected literature includes:
• Physical Biology of the Cell (2nd edition) by R. Phillips (ISBN 9780815344506).
• Primary literature (scientific papers) and lecture notes

None.

Open to students across disciplines interested in understanding the intersection of physics, biology, and interdisciplinary science.

Students from diverse backgrounds, such as biology, chemistry, bioinformatics, biomedical sciences, and engineering, have successfully completed the course. If you have a keen interest in the physics of life processes and enjoy working with data from experiments and models, this course is designed to welcome you.

Continuous feedback during the course of the semester
ECTS
7,5 ECTS
Type of assessment
Oral examination, 25 minutes (no preparation time)
Type of assessment details
The oral exam will take place in the exam week after the course period; the students will beforehand receive the questions for the oral exam and there will be no preparation time at the exam.
Examination prerequisites

Mandatory exercises during the course based on questions in connection to the curriculum. All exercises must be approved in order to register for the oral examination.

Aid
No aids allowed
Marking scale
7-point grading scale
Censorship form
No external censorship
Several internal examiners
Re-exam

Same as the ordinary exam.

If the exam prerequisite is not fulfilled, it will be possible to re-submit the mandatory exercises before the re-exam; please contact the course responsible.

Criteria for exam assessment

See Learning Outcome

Single subject courses (day)

  • Category
  • Hours
  • Lectures
  • 30
  • Class Instruction
  • 20
  • Preparation
  • 105
  • Theory exercises
  • 20
  • Project work
  • 30
  • Exam
  • 1
  • English
  • 206

Kursusinformation

Language
English
Course number
NFYK15006U
ECTS
7,5 ECTS
Programme level
Full Degree Master
Duration

1 block

Placement
Block 1
Schedulegroup
B
Capacity
No limitation – unless you register in the late-registration period (BSc and MSc) or as a credit or single subject student.
Studyboard
Study Board of Physics, Chemistry and Nanoscience
Contracting department
  • The Niels Bohr Institute
Contracting faculty
  • Faculty of Science
Course Coordinator
  • Amin Doostmohammadi   (14-697474787972746d66727266696e4573676e33707a336970)
Saved on the 08-05-2025

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