Kursussøgning, efter- og videreuddannelse – Københavns Universitet

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Kursussøgning, efter- og videreuddannelse

Plant Molecular Biology (PlantMolBiol)

Practical information
Study year 2016/2017
Time
Block 4
Programme level Bachelor
ECTS 7,5 ECTS
Course responsible
  • John Mundy (5-7880796f844b7e6e7470796e70397680396f76)
  • Department of Biology
Course number: NBIA04015U

Course content

Lectures and seminars cover:

  • reproductive and vegetative development
  • genome analysis and gene regulation
  • light and hormone signaling
  • environmental stress & disease
  • applied plant biotechnology


Laboratory exercises cover:

  • plant development, anatomy and mutants
  • transgenics
  • gene cloning and mapping
  • DNA and protein bioinformatics and model organism genome databasing

Learning outcome

By attending this course the student will achieve:

Knowledge:
By the end of the course, students are expected to have knowledge of the aspects of plant molecular biology that are included in the curriculum
covered by assigned reading, lectures, seminar presentations and laboratory exercises (see Absalon). Thus, students will be expected to know,
among other things, about:

  • reproductive and vegetative development
  • genome analysis and gene regulation
  • light and hormone signaling
  • environmental stress & disease
  • applied plant biotechnology
  • transgenics
  • gene cloning and mapping
  • DNA and protein bioinformatics


Skills:
Students are expected to develop the following skills to:

  • Explain the development and anatomy of the model plant Arabidopsis
  • Explain the uses of other model plants and crops
  • Explain how plants assimilate and transport nutrients
  • Explain the occurrence, effects and agricultural uses of the plant hormones (auxin, cytokinin, brassinosteroid, and jasmonic, salicylic, gibberellic and abscisic acids)
  • Explain the principles/steps required for cloning, PCR, sequencing, RT-PCR, mutagenesis, transposon and epitope tagging, reporter and marker genes, plant transformation, epistatic analysis
  • Explain the uses of mutants and how mutant alleles may be cloned
  • Explain forward and reverse genetic screens
  • Explain aspects of plant pathogen interactions including disease resistance and susceptibilities


Competences:
Students are expected to develop competences to:

  • Discuss the advantages and disadvantages of genetically modified plants
  • Discuss and criticize research articles orally and in writing
  • Propose experiments to test scientific models or questions
  • Interpret different types of experimental data introduced in the course
  • Use bioinformatics to search a genome database, annotate the structure of a gene, find mutations in it, identify encoded proteins, compare protein sequences, and propose gene/protein functions

Recommended prerequisites

Open to students of Biochemistry, Biology, Nanotechnology and Molecular Biomedicine who, by the start of the course, have passed all first year courses and half of the second year courses (corresponding to a total of 90 ECTS-points) of their curriculum. Foreign students with similar records may apply. Exceptions will be made if the course is undersubscribed.

Remarks

Students must wear lab coats for the exercises.

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Education

Bacheloruddannelsen i biologi

Studyboard

Study Board of Biology and Animal Science

Course type

Single subject courses (day)

Duration

1 block

Schedulegroup

A
---- SKEMA LINK ----

Teaching and learning methods

Lectures, laboratory and computer practicals, group discussions and student seminars of newer articles in high impact journals.

Capacity

30

Language

English

Literature

See Absalon.

Workload

Category Hours
Exam 10
E-Learning 16
Preparation 66
Lectures 16
Colloquia 8
Practical exercises 64
Theory exercises 6
Project work 20
English 206

Exam

Type of assessment

Continuous assessment
Three written, open book exams must be taken as scheduled during the course. In addition, a bioinformatics question set must be submitted prior to the last written exam.

The final grade is determined by the grades of the three open book exams (90%) and the bioinformatics question set (10%).
Students can pass the exam without passing all the part-examinations, if the total grade is passed. The passed part-examinations may be reused in a reexamination.

Marking scale

7-point grading scale

Criteria for exam assessment

The maximum grade of 12 may be given to students who master all course objectives (knowledge, skills and competences) and whose
average exam score is between the 90th and 99th percentiles.

Censorship form

No external censorship
One internal examiner

Re-exam

4 hour written open book exam

Mere information om kurset
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